Meh, MGS3 was harmless in comparison to 4 if you ask me. I enjoyed 3 quite a bit, since it´s about the only time you play as the cool Snake. I never played the revised version with the better camera but still, I liked it a lot. Way more than 2 at least.
Twin Snakes was...fucking retarded but funny if you knew the original game...and it was fucking expensive so I´m not gonna hate it too much
But I agree, Kojima does have a serious problem in the storytelling-department, he just doesn´t know how to do it right which morphed into his strange and unique style over the years that is not for everyone.
It´s unique but it´s NOT good from a writing-technical point of view.
I started with Ghost Trick yesterday and I love that game. That is some awesome animation going on there and the story is pretty nice too. And Missile (WELCOME!), yeah of course.
Oh and what game is that, Dextire? Looks like fun.